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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs10443954 chr10:52139130 C/T CDH15 chr16:89238175-89261900:+ 0.45 5.99 4.89E-9 Box Plot
BLCA rs10462084 chr5:44901349 A/G SLC25A16 chr10:70237756-70287231:- -0.44 -5.96 5.69E-9 Box Plot
BLCA rs10469206 chr18:52463001 A/G LMAN1 chr18:56995055-57027194:- 0.69 6.19 1.58E-9 Box Plot
BLCA rs10476217 chr5:176559735 G/C LOC388955 chr2:63849182-63850159:- -0.55 -10.87 3.56E-24 Box Plot
BLCA rs10476219 chr5:176628548 A/G LOC388955 chr2:63849182-63850159:- -0.51 -11.28 1.16E-25 Box Plot
BLCA rs10481714 chr9:94090271 A/G ALG2 chr9:101978708-101984238:- 0.72 6.71 7.22E-11 Box Plot
BLCA rs10481714 chr9:94090271 A/G ANP32B chr9:100745643-100778225:+ 0.43 6.06 3.18E-9 Box Plot
BLCA rs10481714 chr9:94090271 A/G FAM120A chr9:96214004-96328389:+ 0.58 6.11 2.51E-9 Box Plot
BLCA rs10481714 chr9:94090271 A/G FAM120AOS chr9:96208776-96215874:- 0.62 6.26 1.06E-9 Box Plot
BLCA rs10481714 chr9:94090271 A/G GAPVD1 chr9:128024073-128129486:+ 0.47 6 4.53E-9 Box Plot
BLCA rs10481714 chr9:94090271 A/G MRPL50 chr9:104149915-104160896:- 0.57 6.11 2.38E-9 Box Plot
BLCA rs10481714 chr9:94090271 A/G URM1 chr9:131133598-131154295:+ 0.53 6.3 8.35E-10 Box Plot
BLCA rs10481714 chr9:94090271 A/G ZCCHC6 chr9:88902648-88969369:- 0.58 6.4 4.57E-10 Box Plot
BLCA rs10481714 chr9:94090271 A/G ZNF510 chr9:99518147-99540411:- 0.53 5.98 5.17E-9 Box Plot
BLCA rs10484442 chr6:26555879 A/G ZNF322B chr9:99957633-99961910:- 0.46 8.01 1.43E-14 Box Plot